Comparative analysis of bacterioplankton assemblages from maritime Antarctic freshwater lakes with contrasting trophic status
The bacterioplankton assemblages of eight maritime Antarctic lakes with a wide range of trophic status and geographic span (six lakes from Hope Bay, Antarctic Peninsula and two from Potter Peninsula, King George Island) were described using denaturing gradient gel electrophoresis and band sequencing...
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todo:paper_07224060_v32_n6_p923_Schiaffino2023-10-03T15:37:05Z Comparative analysis of bacterioplankton assemblages from maritime Antarctic freshwater lakes with contrasting trophic status Schiaffino, M.R. Unrein, F. Gasol, J.M. Farias, M.E. Estevez, C. Balagué, V. Izaguirre, I. 16S rRNA gene Bacterioplankton Denaturing gradient gel electrophoresis Hope Bay (Antarctic Peninsula) Maritime Antarctic lakes Potter Peninsula (King George Island) bacterioplankton bacterium cluster analysis comparative study cyanobacterium dominance electrokinesis gel gene microbial community RNA trophic status Antarctic Peninsula Antarctica Hope Bay King George Island Potter Peninsula South Shetland Islands West Antarctica Actinobacteria Bacteroidetes Betaproteobacteria Cyanobacteria The bacterioplankton assemblages of eight maritime Antarctic lakes with a wide range of trophic status and geographic span (six lakes from Hope Bay, Antarctic Peninsula and two from Potter Peninsula, King George Island) were described using denaturing gradient gel electrophoresis and band sequencing during two consecutive austral summers (2003-2004). Analyses of the gels identified a total of 230 bands spread across 57 different positions. Among those bands, 14 were shared between lakes from Hope Bay and Potter Peninsula, 17 were observed only in particular lakes, and 17 were registered both years in the same lake. We successfully reamplified and sequenced 43 bands located in 36 different positions belonging to Bacteroidetes, Actinobacteria, Betaproteobacteria and Cyanobacteria. The closest matches for 63% of the sequenced bands were from Antarctic or from other cold environment clones and sequences already in the databases, suggesting the widespread dominance of microbial communities adapted to cold habitats. The results of the multivariate analyses (Cluster Analysis and CCA) indicated that the nutrient status of the lake influences the bacterioplankton assemblages. © 2009 Springer-Verlag. Fil:Schiaffino, M.R. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. Fil:Unrein, F. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. Fil:Izaguirre, I. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. JOUR info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by/2.5/ar http://hdl.handle.net/20.500.12110/paper_07224060_v32_n6_p923_Schiaffino |
| institution |
Universidad de Buenos Aires |
| institution_str |
I-28 |
| repository_str |
R-134 |
| collection |
Biblioteca Digital - Facultad de Ciencias Exactas y Naturales (UBA) |
| topic |
16S rRNA gene Bacterioplankton Denaturing gradient gel electrophoresis Hope Bay (Antarctic Peninsula) Maritime Antarctic lakes Potter Peninsula (King George Island) bacterioplankton bacterium cluster analysis comparative study cyanobacterium dominance electrokinesis gel gene microbial community RNA trophic status Antarctic Peninsula Antarctica Hope Bay King George Island Potter Peninsula South Shetland Islands West Antarctica Actinobacteria Bacteroidetes Betaproteobacteria Cyanobacteria |
| spellingShingle |
16S rRNA gene Bacterioplankton Denaturing gradient gel electrophoresis Hope Bay (Antarctic Peninsula) Maritime Antarctic lakes Potter Peninsula (King George Island) bacterioplankton bacterium cluster analysis comparative study cyanobacterium dominance electrokinesis gel gene microbial community RNA trophic status Antarctic Peninsula Antarctica Hope Bay King George Island Potter Peninsula South Shetland Islands West Antarctica Actinobacteria Bacteroidetes Betaproteobacteria Cyanobacteria Schiaffino, M.R. Unrein, F. Gasol, J.M. Farias, M.E. Estevez, C. Balagué, V. Izaguirre, I. Comparative analysis of bacterioplankton assemblages from maritime Antarctic freshwater lakes with contrasting trophic status |
| topic_facet |
16S rRNA gene Bacterioplankton Denaturing gradient gel electrophoresis Hope Bay (Antarctic Peninsula) Maritime Antarctic lakes Potter Peninsula (King George Island) bacterioplankton bacterium cluster analysis comparative study cyanobacterium dominance electrokinesis gel gene microbial community RNA trophic status Antarctic Peninsula Antarctica Hope Bay King George Island Potter Peninsula South Shetland Islands West Antarctica Actinobacteria Bacteroidetes Betaproteobacteria Cyanobacteria |
| description |
The bacterioplankton assemblages of eight maritime Antarctic lakes with a wide range of trophic status and geographic span (six lakes from Hope Bay, Antarctic Peninsula and two from Potter Peninsula, King George Island) were described using denaturing gradient gel electrophoresis and band sequencing during two consecutive austral summers (2003-2004). Analyses of the gels identified a total of 230 bands spread across 57 different positions. Among those bands, 14 were shared between lakes from Hope Bay and Potter Peninsula, 17 were observed only in particular lakes, and 17 were registered both years in the same lake. We successfully reamplified and sequenced 43 bands located in 36 different positions belonging to Bacteroidetes, Actinobacteria, Betaproteobacteria and Cyanobacteria. The closest matches for 63% of the sequenced bands were from Antarctic or from other cold environment clones and sequences already in the databases, suggesting the widespread dominance of microbial communities adapted to cold habitats. The results of the multivariate analyses (Cluster Analysis and CCA) indicated that the nutrient status of the lake influences the bacterioplankton assemblages. © 2009 Springer-Verlag. |
| format |
JOUR |
| author |
Schiaffino, M.R. Unrein, F. Gasol, J.M. Farias, M.E. Estevez, C. Balagué, V. Izaguirre, I. |
| author_facet |
Schiaffino, M.R. Unrein, F. Gasol, J.M. Farias, M.E. Estevez, C. Balagué, V. Izaguirre, I. |
| author_sort |
Schiaffino, M.R. |
| title |
Comparative analysis of bacterioplankton assemblages from maritime Antarctic freshwater lakes with contrasting trophic status |
| title_short |
Comparative analysis of bacterioplankton assemblages from maritime Antarctic freshwater lakes with contrasting trophic status |
| title_full |
Comparative analysis of bacterioplankton assemblages from maritime Antarctic freshwater lakes with contrasting trophic status |
| title_fullStr |
Comparative analysis of bacterioplankton assemblages from maritime Antarctic freshwater lakes with contrasting trophic status |
| title_full_unstemmed |
Comparative analysis of bacterioplankton assemblages from maritime Antarctic freshwater lakes with contrasting trophic status |
| title_sort |
comparative analysis of bacterioplankton assemblages from maritime antarctic freshwater lakes with contrasting trophic status |
| url |
http://hdl.handle.net/20.500.12110/paper_07224060_v32_n6_p923_Schiaffino |
| work_keys_str_mv |
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| _version_ |
1807321867731599360 |