Isolation and characterization of new microsatellite markers for application in population genetic studies of Caiman latirostris and related species

Wild populations of Caiman latirostris are subject to sustainable use programs in Argentina, becoming a species with important impact in the regional economy, based in their skin and meat. Genetic studies are fundamental to acquire information on important parameters for conservation and management,...

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Autores principales: Larriera, A., Siroski, P.A., Rueda, E.C., Saidman, B.O., Amavet, P.S.
Formato: JOUR
Materias:
conservation genetics
crocodilians
SSRs
sustainable use
crocodilian
genetic marker
meat
population genetics
regional economy
skin
sustainability
wild population
Argentina
Caiman latirostris
Caiman yacare
Crocodylidae (all crocodiles)
Acceso en línea:http://hdl.handle.net/20.500.12110/paper_01735373_v36_n2_p175_Larriera
Aporte de:
Biblioteca Digital - Facultad de Ciencias Exactas y Naturales (UBA) de Universidad de Buenos Aires
id todo:paper_01735373_v36_n2_p175_Larriera
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spelling todo:paper_01735373_v36_n2_p175_Larriera2023-10-03T15:07:42Z Isolation and characterization of new microsatellite markers for application in population genetic studies of Caiman latirostris and related species Larriera, A. Siroski, P.A. Rueda, E.C. Saidman, B.O. Amavet, P.S. conservation genetics crocodilians SSRs sustainable use conservation genetics crocodilian genetic marker meat population genetics regional economy skin sustainability wild population Argentina Caiman latirostris Caiman yacare Crocodylidae (all crocodiles) Wild populations of Caiman latirostris are subject to sustainable use programs in Argentina, becoming a species with important impact in the regional economy, based in their skin and meat. Genetic studies are fundamental to acquire information on important parameters for conservation and management, which may be obtained from analysis of molecular markers. Some microsatellites have been previously isolated in this species, but due to some difficulties in using them, we obtained new ones using Next Generation Sequencing approach. This study reports eight new microsatellites for C. latirostris and tests their utility in a related species, Caiman yacare, with successful application in population genetics and mating systems studies. In addition, we shared data about a novel and fast bioinformatics tool to find microsatellites and to design their corresponding primers. Fil:Saidman, B.O. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. Fil:Amavet, P.S. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. JOUR info:eu-repo/semantics/openAccess http://creativecommons.org/licenses/by/2.5/ar http://hdl.handle.net/20.500.12110/paper_01735373_v36_n2_p175_Larriera
institution Universidad de Buenos Aires
institution_str I-28
repository_str R-134
collection Biblioteca Digital - Facultad de Ciencias Exactas y Naturales (UBA)
topic conservation genetics
crocodilians
SSRs
sustainable use
conservation genetics
crocodilian
genetic marker
meat
population genetics
regional economy
skin
sustainability
wild population
Argentina
Caiman latirostris
Caiman yacare
Crocodylidae (all crocodiles)
spellingShingle conservation genetics
crocodilians
SSRs
sustainable use
conservation genetics
crocodilian
genetic marker
meat
population genetics
regional economy
skin
sustainability
wild population
Argentina
Caiman latirostris
Caiman yacare
Crocodylidae (all crocodiles)
Larriera, A.
Siroski, P.A.
Rueda, E.C.
Saidman, B.O.
Amavet, P.S.
Isolation and characterization of new microsatellite markers for application in population genetic studies of Caiman latirostris and related species
topic_facet conservation genetics
crocodilians
SSRs
sustainable use
conservation genetics
crocodilian
genetic marker
meat
population genetics
regional economy
skin
sustainability
wild population
Argentina
Caiman latirostris
Caiman yacare
Crocodylidae (all crocodiles)
description Wild populations of Caiman latirostris are subject to sustainable use programs in Argentina, becoming a species with important impact in the regional economy, based in their skin and meat. Genetic studies are fundamental to acquire information on important parameters for conservation and management, which may be obtained from analysis of molecular markers. Some microsatellites have been previously isolated in this species, but due to some difficulties in using them, we obtained new ones using Next Generation Sequencing approach. This study reports eight new microsatellites for C. latirostris and tests their utility in a related species, Caiman yacare, with successful application in population genetics and mating systems studies. In addition, we shared data about a novel and fast bioinformatics tool to find microsatellites and to design their corresponding primers.
format JOUR
author Larriera, A.
Siroski, P.A.
Rueda, E.C.
Saidman, B.O.
Amavet, P.S.
author_facet Larriera, A.
Siroski, P.A.
Rueda, E.C.
Saidman, B.O.
Amavet, P.S.
author_sort Larriera, A.
title Isolation and characterization of new microsatellite markers for application in population genetic studies of Caiman latirostris and related species
title_short Isolation and characterization of new microsatellite markers for application in population genetic studies of Caiman latirostris and related species
title_full Isolation and characterization of new microsatellite markers for application in population genetic studies of Caiman latirostris and related species
title_fullStr Isolation and characterization of new microsatellite markers for application in population genetic studies of Caiman latirostris and related species
title_full_unstemmed Isolation and characterization of new microsatellite markers for application in population genetic studies of Caiman latirostris and related species
title_sort isolation and characterization of new microsatellite markers for application in population genetic studies of caiman latirostris and related species
url http://hdl.handle.net/20.500.12110/paper_01735373_v36_n2_p175_Larriera
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AT saidmanbo isolationandcharacterizationofnewmicrosatellitemarkersforapplicationinpopulationgeneticstudiesofcaimanlatirostrisandrelatedspecies
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