Phylogeny of the Order Tintinnida (Ciliophora, Spirotrichea) Inferred from Small- and Large-Subunit rRNA Genes

Concatenated sequences of small- and large-subunit rRNA genes were used to infer the phylogeny of 29 species in six genera of Tintinnida. We confirmed previous results on the positions of major clusters and the grouping of various genera, including Stenosemella, the paraphyletic Tintinnopsis, the ne...

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Detalles Bibliográficos
Autores principales: Santoferrara, Luciana F., Alder, Viviana A.
Publicado: 2012
Materias:
Ciliate
Concatenated phylogeny
LSU rDNA
SSU rDNA
Tintinnid
protozoal DNA
protozoal RNA
ribosome DNA
ribosome RNA
RNA 18S
RNA, ribosomal, 26S
ciliate
genetic marker
mitochondrial DNA
phylogenetics
phylogeny
reconstruction
chemistry
classification
cluster analysis
DNA sequence
genetics
review
RNA gene
Ciliophora
Cluster Analysis
DNA, Protozoan
DNA, Ribosomal
Genes, rRNA
Phylogeny
RNA, Protozoan
RNA, Ribosomal
RNA, Ribosomal, 18S
Sequence Analysis, DNA
Eutintinnus
Favella
Helicostomella
Spirotrichea
Stenosemella
Tintinnida
Tintinnidium
Tintinnopsis
Acceso en línea:https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_10665234_v59_n4_p423_Santoferrara
http://hdl.handle.net/20.500.12110/paper_10665234_v59_n4_p423_Santoferrara
Aporte de:
Biblioteca Digital - Facultad de Ciencias Exactas y Naturales (UBA) de Universidad de Buenos Aires
id paper:paper_10665234_v59_n4_p423_Santoferrara
record_format dspace
spelling paper:paper_10665234_v59_n4_p423_Santoferrara2023-06-08T16:04:19Z Phylogeny of the Order Tintinnida (Ciliophora, Spirotrichea) Inferred from Small- and Large-Subunit rRNA Genes Santoferrara, Luciana F. Alder, Viviana A. Ciliate Concatenated phylogeny LSU rDNA SSU rDNA Tintinnid protozoal DNA protozoal RNA ribosome DNA ribosome RNA RNA 18S RNA, ribosomal, 26S ciliate genetic marker mitochondrial DNA phylogenetics phylogeny reconstruction chemistry ciliate classification cluster analysis DNA sequence genetics phylogeny review RNA gene Ciliophora Cluster Analysis DNA, Protozoan DNA, Ribosomal Genes, rRNA Phylogeny RNA, Protozoan RNA, Ribosomal RNA, Ribosomal, 18S Sequence Analysis, DNA Ciliophora Eutintinnus Favella Helicostomella Spirotrichea Stenosemella Tintinnida Tintinnidium Tintinnopsis Concatenated sequences of small- and large-subunit rRNA genes were used to infer the phylogeny of 29 species in six genera of Tintinnida. We confirmed previous results on the positions of major clusters and the grouping of various genera, including Stenosemella, the paraphyletic Tintinnopsis, the newly investigated Helicostomella, and some species of the polyphyletic Favella. Tintinnidium and Eutintinnus were found to be monophyletic. This study contributes to tintinnid phylogenetic reconstruction by increasing both the number of species and the range of genetic markers analyzed. © 2012 The Author(s) Journal of Eukaryotic Microbiology. Fil:Santoferrara, L.F. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. Fil:Alder, V.A. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales; Argentina. 2012 https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_10665234_v59_n4_p423_Santoferrara http://hdl.handle.net/20.500.12110/paper_10665234_v59_n4_p423_Santoferrara
institution Universidad de Buenos Aires
institution_str I-28
repository_str R-134
collection Biblioteca Digital - Facultad de Ciencias Exactas y Naturales (UBA)
topic Ciliate
Concatenated phylogeny
LSU rDNA
SSU rDNA
Tintinnid
protozoal DNA
protozoal RNA
ribosome DNA
ribosome RNA
RNA 18S
RNA, ribosomal, 26S
ciliate
genetic marker
mitochondrial DNA
phylogenetics
phylogeny
reconstruction
chemistry
ciliate
classification
cluster analysis
DNA sequence
genetics
phylogeny
review
RNA gene
Ciliophora
Cluster Analysis
DNA, Protozoan
DNA, Ribosomal
Genes, rRNA
Phylogeny
RNA, Protozoan
RNA, Ribosomal
RNA, Ribosomal, 18S
Sequence Analysis, DNA
Ciliophora
Eutintinnus
Favella
Helicostomella
Spirotrichea
Stenosemella
Tintinnida
Tintinnidium
Tintinnopsis
spellingShingle Ciliate
Concatenated phylogeny
LSU rDNA
SSU rDNA
Tintinnid
protozoal DNA
protozoal RNA
ribosome DNA
ribosome RNA
RNA 18S
RNA, ribosomal, 26S
ciliate
genetic marker
mitochondrial DNA
phylogenetics
phylogeny
reconstruction
chemistry
ciliate
classification
cluster analysis
DNA sequence
genetics
phylogeny
review
RNA gene
Ciliophora
Cluster Analysis
DNA, Protozoan
DNA, Ribosomal
Genes, rRNA
Phylogeny
RNA, Protozoan
RNA, Ribosomal
RNA, Ribosomal, 18S
Sequence Analysis, DNA
Ciliophora
Eutintinnus
Favella
Helicostomella
Spirotrichea
Stenosemella
Tintinnida
Tintinnidium
Tintinnopsis
Santoferrara, Luciana F.
Alder, Viviana A.
Phylogeny of the Order Tintinnida (Ciliophora, Spirotrichea) Inferred from Small- and Large-Subunit rRNA Genes
topic_facet Ciliate
Concatenated phylogeny
LSU rDNA
SSU rDNA
Tintinnid
protozoal DNA
protozoal RNA
ribosome DNA
ribosome RNA
RNA 18S
RNA, ribosomal, 26S
ciliate
genetic marker
mitochondrial DNA
phylogenetics
phylogeny
reconstruction
chemistry
ciliate
classification
cluster analysis
DNA sequence
genetics
phylogeny
review
RNA gene
Ciliophora
Cluster Analysis
DNA, Protozoan
DNA, Ribosomal
Genes, rRNA
Phylogeny
RNA, Protozoan
RNA, Ribosomal
RNA, Ribosomal, 18S
Sequence Analysis, DNA
Ciliophora
Eutintinnus
Favella
Helicostomella
Spirotrichea
Stenosemella
Tintinnida
Tintinnidium
Tintinnopsis
description Concatenated sequences of small- and large-subunit rRNA genes were used to infer the phylogeny of 29 species in six genera of Tintinnida. We confirmed previous results on the positions of major clusters and the grouping of various genera, including Stenosemella, the paraphyletic Tintinnopsis, the newly investigated Helicostomella, and some species of the polyphyletic Favella. Tintinnidium and Eutintinnus were found to be monophyletic. This study contributes to tintinnid phylogenetic reconstruction by increasing both the number of species and the range of genetic markers analyzed. © 2012 The Author(s) Journal of Eukaryotic Microbiology.
author Santoferrara, Luciana F.
Alder, Viviana A.
author_facet Santoferrara, Luciana F.
Alder, Viviana A.
author_sort Santoferrara, Luciana F.
title Phylogeny of the Order Tintinnida (Ciliophora, Spirotrichea) Inferred from Small- and Large-Subunit rRNA Genes
title_short Phylogeny of the Order Tintinnida (Ciliophora, Spirotrichea) Inferred from Small- and Large-Subunit rRNA Genes
title_full Phylogeny of the Order Tintinnida (Ciliophora, Spirotrichea) Inferred from Small- and Large-Subunit rRNA Genes
title_fullStr Phylogeny of the Order Tintinnida (Ciliophora, Spirotrichea) Inferred from Small- and Large-Subunit rRNA Genes
title_full_unstemmed Phylogeny of the Order Tintinnida (Ciliophora, Spirotrichea) Inferred from Small- and Large-Subunit rRNA Genes
title_sort phylogeny of the order tintinnida (ciliophora, spirotrichea) inferred from small- and large-subunit rrna genes
publishDate 2012
url https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_10665234_v59_n4_p423_Santoferrara
http://hdl.handle.net/20.500.12110/paper_10665234_v59_n4_p423_Santoferrara
work_keys_str_mv AT santoferraralucianaf phylogenyoftheordertintinnidaciliophoraspirotricheainferredfromsmallandlargesubunitrrnagenes
AT aldervivianaa phylogenyoftheordertintinnidaciliophoraspirotricheainferredfromsmallandlargesubunitrrnagenes
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