Analysis of the genetic diversity and phylogenetic relationships of putative human papillomavirus types

More than 170 human papillomavirus (HPV) types have been completely sequenced, curated and divided into five genera: Alphapapillomavirus, Betapapillomavirus, Gammapapillomavirus, Mupapillomavirus and Nupapillomavirus. With the application of PCR methods, hundreds of putative novel HPV types have bee...

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Detalles Bibliográficos
Autores principales: Chouhy, Diego, Bolatti, Elisa María, Perez, Germán Roberto, Giri, Adriana Angélica
Lenguaje:Inglés
Publicado: 2017
Materias:
Human papillomavirus
Putative types
Diversity
Acceso en línea:https://dx.doi.org/10.1099/vir.0.055137-0
http://hdl.handle.net/2133/9862
http://hdl.handle.net/2133/9862
Aporte de:
Repositorio Hipermedial de la Universidad Nacional de Rosario (UNR) de Universidad Nacional de Rosario
id I15-R121-2133-9862
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institution Universidad Nacional de Rosario
institution_str I-15
repository_str R-121
collection Repositorio Hipermedial de la Universidad Nacional de Rosario (UNR)
language Inglés
orig_language_str_mv eng
topic Human papillomavirus
Putative types
Diversity
spellingShingle Human papillomavirus
Putative types
Diversity
Chouhy, Diego
Bolatti, Elisa María
Perez, Germán Roberto
Giri, Adriana Angélica
Analysis of the genetic diversity and phylogenetic relationships of putative human papillomavirus types
topic_facet Human papillomavirus
Putative types
Diversity
description More than 170 human papillomavirus (HPV) types have been completely sequenced, curated and divided into five genera: Alphapapillomavirus, Betapapillomavirus, Gammapapillomavirus, Mupapillomavirus and Nupapillomavirus. With the application of PCR methods, hundreds of putative novel HPV types have been identified as PCR amplicons in mucosa and skin. However, at present there are no studies reporting a systematic search of the currently known L1 amplicons and their phylogenetic relationships. This survey revealed the existence of at least 202 different putative HPV types that are pending for full-genome characterization: five alphapapillomaviruses, 37 betapapillomaviruses, 159 gammapapillomaviruses and one mupapillomavirus. All potential viruses of the genera Alphapapillomavirus and Betapapillomavirus were grouped in the defined species, while 59 putative gammapapillomaviruses types were segregated in 21 unidentified putative species. These data highlight the need for progress in the identification of additional taxa of the family Papillomaviridae in order to elucidate the diversity, evolution and medical implications of these viruses.
author Chouhy, Diego
Bolatti, Elisa María
Perez, Germán Roberto
Giri, Adriana Angélica
author_facet Chouhy, Diego
Bolatti, Elisa María
Perez, Germán Roberto
Giri, Adriana Angélica
author_sort Chouhy, Diego
title Analysis of the genetic diversity and phylogenetic relationships of putative human papillomavirus types
title_short Analysis of the genetic diversity and phylogenetic relationships of putative human papillomavirus types
title_full Analysis of the genetic diversity and phylogenetic relationships of putative human papillomavirus types
title_fullStr Analysis of the genetic diversity and phylogenetic relationships of putative human papillomavirus types
title_full_unstemmed Analysis of the genetic diversity and phylogenetic relationships of putative human papillomavirus types
title_sort analysis of the genetic diversity and phylogenetic relationships of putative human papillomavirus types
publishDate 2017
url https://dx.doi.org/10.1099/vir.0.055137-0
http://hdl.handle.net/2133/9862
http://hdl.handle.net/2133/9862
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