Pseudomonas extremaustralis sp. nov., a poly(3-hydroxybutyrate) producer isolated from an antarctic environment
A Gram-negative, mobile, rod-shaped, non-spore-forming bacterium (strain 14-3T) was isolated from a temporary pond in Antarctica. On the basis of 16S rRNA gene sequence similarity, strain 14-3T was shown to belong to the genus Pseudomonas sensu stricto. Physiological and biochemical tests supported...
Guardado en:
| Autor principal: | |
|---|---|
| Otros Autores: | , , , , , |
| Formato: | Capítulo de libro |
| Lenguaje: | Inglés |
| Publicado: |
2009
|
| Acceso en línea: | Registro en Scopus DOI Handle Registro en la Biblioteca Digital |
| Aporte de: | Registro referencial: Solicitar el recurso aquí |
| LEADER | 13345caa a22013097a 4500 | ||
|---|---|---|---|
| 001 | PAPER-8370 | ||
| 003 | AR-BaUEN | ||
| 005 | 20230518203810.0 | ||
| 008 | 190411s2009 xx ||||fo|||| 00| 0 eng|d | ||
| 024 | 7 | |2 scopus |a 2-s2.0-70349962990 | |
| 024 | 7 | |2 Molecular Sequence Numbers |a GENBANK: AF064457, AF064459, AF064460, AF268029, AF374472, AJ492829, AJ492831, AJ537601, AJ537602, AJ581999, AJ583501, D84028, DQ207731, Z76662, Z76663; | |
| 024 | 7 | |2 cas |a arginine deiminase, 9027-98-9, 9074-85-5; casein, 9000-71-9; esculin, 531-75-9; gelatin, 9000-70-8; indole, 120-72-9; poly(3 hydroxybutyric acid), 26063-00-3; urease, 9002-13-5; DNA, Bacterial; DNA, Ribosomal; Hydroxybutyrates; Polyesters; RNA, Ribosomal, 16S; poly-beta-hydroxybutyrate, 26063-00-3 | |
| 040 | |a Scopus |b spa |c AR-BaUEN |d AR-BaUEN | ||
| 030 | |a CUMID | ||
| 100 | 1 | |a López, N.I. | |
| 245 | 1 | 0 | |a Pseudomonas extremaustralis sp. nov., a poly(3-hydroxybutyrate) producer isolated from an antarctic environment |
| 260 | |c 2009 | ||
| 270 | 1 | 0 | |m López, N. I.; Dpto. de Qca. Biológica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina; email: nan@qb.fcen.uba.ar |
| 506 | |2 openaire |e Política editorial | ||
| 504 | |a Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W., Lipman, D.J., Gapped BLAST and PSI-BLAST: A new generation of protein database search programs (1997) Nucleic Acids Research, 25 (17), pp. 3389-3402. , DOI 10.1093/nar/25.17.3389 | ||
| 504 | |a Anzai, Y., Kim, H., Park, J.Y., Wakabayashi, H., Oyaizu, H., Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence (2000) Int J Syst Bacteriol, 50, pp. 1563-1589 | ||
| 504 | |a Ayub, N.D., Pettinari, M.J., Ruiz, J.A., López, N.I., A polyhydroxybutyrate-producing Pseudomonas sp. isolated from Antarctic environments with high stress resistance (2004) Curr Microbiol, 49, pp. 170-174. , 15386099 10.1007/s00284-004-4254-2 | ||
| 504 | |a Ayub, N.D., Julia Pettinari, M., Mendez, B.S., Lopez, N.I., Impaired polyhydroxybutyrate biosynthesis from glucose in Pseudomonas sp. 14-3 is due to a defective β-ketothiolase gene (2006) FEMS Microbiology Letters, 264 (1), pp. 125-131. , DOI 10.1111/j.1574-6968.2006.00446.x | ||
| 504 | |a Ayub, N.D., Pettinari, M.J., Mendez, B.S., Lopez, N.I., The polyhydroxyalkanoate genes of a stress resistant Antarctic Pseudomonas are situated within a genomic island (2007) Plasmid, 58 (3), pp. 240-248. , DOI 10.1016/j.plasmid.2007.05.003, PII S0147619X07000741 | ||
| 504 | |a Ayub, N.D., Tribelli, P.M., López, N.I., Polyhydroxyalkanoates are essential for maintenance of redox state in the Antarctic bacterium Pseudomonas sp. 14-3 during low-temperature adaptation (2009) Extremophiles, 13, pp. 59-66. , 18931822 10.1007/s00792-008-0197-z | ||
| 504 | |a Behrendt, U., Ulrich, A., Schumann, P., Fluorescent pseudomonads associated with the phyllosphere of grasses; Pseudomonas trivialis sp. nov., Pseudomonas poae sp. nov. and Pseudomonas congelans sp. nov (2003) International Journal of Systematic and Evolutionary Microbiology, 53 (5), pp. 1461-1469. , DOI 10.1099/ijs.0.02567-0 | ||
| 504 | |a Bozal, N., Montes, M.J., Mercade, E., Pseudomonas guineae sp. nov., a novel psychrotolerant bacterium from an Antarctic environment (2007) International Journal of Systematic and Evolutionary Microbiology, 57 (11), pp. 2609-2612. , DOI 10.1099/ijs.0.65141-0 | ||
| 504 | |a Braunegg, G., Sonnleitner, B., Lafferty, R.M., A rapid gas chromatographic method for the determination of poly - Hydroxybutyric acid in microbial biomass (1978) Eur J Appl Microbiol Biotechnol, 6, pp. 29-37. , 10.1007/BF00500854 | ||
| 504 | |a Bruni, V., Gugliandolo, C., Maugeri, T., Allegra, A., Psychrotrophic bacteria from a coastal station in the Ross Sea (Terra Nova Bay, Antarctica) (1999) New Microbiol, 22, pp. 357-363. , 10555207 | ||
| 504 | |a Cashion, P., Holder Franklin, M.A., McCully, J., Franklin, M., A rapid method for the base ratio determination of bacterial DNA (1977) Analytical Biochemistry, 81 (2), pp. 461-466. , DOI 10.1016/0003-2697(77)90720-5 | ||
| 504 | |a De Ley, J., Cattoir, H., Reynaerts, A., The quantitative measurement of DNA hybridization from renaturation rates (1970) Eur J Biochem, 12, pp. 133-142. , 4984993 10.1111/j.1432-1033.1970.tb00830.x | ||
| 504 | |a De Smet, M.J., Eggink, G., Witholt, B., Kingma, J., Wynberg, H., Characterization of intracellular inclusions formed by Pseudomonas oleovorans during growth on octane (1983) J Bacteriol, 154, pp. 870-878. , 6841319 | ||
| 504 | |a Diard, S., Carlier, J.P., Ageron, E., Grimont, P.A.D., Langlois, V., Guerin, P., Bouvet, O.M.M., Accumulation of Poly(3-hydroxybutyrate) from octanoate in different Pseudomonas belonging to the rRNA homology group i (2002) Syst Appl Microbiol, 25, pp. 183-188. , 12353870 10.1078/0723-2020-00114 | ||
| 504 | |a Elomari, M., Coroler, L., Hoste, B., Gillis, M., Izard, D., Leclerc, H., DNA relatedness among Pseudomonas strains isolated from natural mineral waters and proposal of Pseudomonas veronii sp. nov. (1996) Int J Syst Bacteriol, 46, pp. 1138-1144. , 8863448 | ||
| 504 | |a Escara, J.F., Hutton, J.R., Thermal stability and renaturation of DNA in dimethyl sulfoxide solutions: Acceleration of the renaturation rate (1980) Biopolymers, 19, pp. 1315-1327. , 7397315 10.1002/bip.1980.360190708 | ||
| 504 | |a Huss, V.A.R., Festl, H., Schleifer, K.H., Studies on the spectrophotometric determination of DNA hybridization from renaturation rates (1983) Syst Appl Microbiol, 4, pp. 184-192 | ||
| 504 | |a Ivanova, E.P., Gorshkova, N.M., Sawabe, T., Hayashi, K., Kalinovskaya, N.I., Lysenko, A.M., Zhukova, N.V., Christen, R., Pseudomonas extremorientalis sp. nov., isolated from a driking water reservoir (2002) International Journal of Systematic and Evolutionary Microbiology, 52 (6), pp. 2113-2120. , DOI 10.1099/ijs.0.02197-0 | ||
| 504 | |a Kämpfer, P., Kroppenstedt, R.M., Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa (1996) Can J Microbiol, 42, pp. 989-1005 | ||
| 504 | |a Kessler, B., Palleroni, N.J., Taxonomic implications of synthesis of poly - Hydroxybutyrate and other poly - Hydroxyalkanoates by aerobic pseudomonads (2000) Int J Syst Evol Microbiol, 50, pp. 711-713. , 10758879 | ||
| 504 | |a King, E.O., Ward, M.K., Raney, D.E., Two simple media for the demonstration of pyocyanin and fluorescein (1954) J Lab Clin Med, 44, pp. 301-307. , 13184240 | ||
| 504 | |a Kriss, A.E., Mitskevich, I.N., Rozanova, E.P., Osnitskaia, L.K., Microbiological studies of the Wanda Lake (Antarctica) (1976) Mikrobiologiya, 45, pp. 1075-1081 | ||
| 504 | |a Kumar, S., Tamura, K., Nei, M., MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment (2004) Brief Bioinform, 5, pp. 150-163. , 15260895 10.1093/bib/5.2.150 | ||
| 504 | |a Maugeri, T.L., Gugliandolo, C., Bruni, V., Heterotrophic bacteria in the Ross Sea (Terra Nova Bay, Antarctica) (1996) New Microbiol, 19, pp. 67-76. , 8673854 | ||
| 504 | |a Moore, E.R.B., Mau, M., Arnscheidt, A., Bottger, E.C., Hutson, R.A., Collins, M.D., Van De Peer, Y., Timmis, K.N., The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships (1996) Syst Appl Microbiol, 19, pp. 478-492 | ||
| 504 | |a Migula, W., Über ein neues System der Bakterien (1894) Arb Bakteriol Inst Karlsruhe, 1, pp. 235-238 | ||
| 504 | |a Miller, L.T., A single derivatization method for bacterial fatty acid methyl esters including hydroxy acids (1982) J Clin Microbiol, 16, pp. 584-586. , 7130373 | ||
| 504 | |a Ostle, A., Holt, J.G., Nile Blue A as a fluorescent stain for poly-hydroxybutyrate (1982) Appl Environ Microbiol, 44, pp. 238-241. , 6181737 | ||
| 504 | |a Rainey, F.A., Stackebrandt, E., 16S rDNA analysis reveals phylogenetic diversity among the polysaccharolytic clostridia (1993) FEMS Microbiol Lett, 113, pp. 125-128. , 7505248 10.1111/j.1574-6968.1993.tb06501.x | ||
| 504 | |a Reddy, G.S.N., Matsumoto, G.I., Schumann, P., Stackerbrandt, E., Shivaji, S., Psychrophilic pseudomonads from Antarctica: Pseudomonas antartica sp. nov., Pseudomonas meridiana sp. nov. and Pseudomonas proteolytica sp. nov (2004) International Journal of Systematic and Evolutionary Microbiology, 54 (3), pp. 713-719. , DOI 10.1099/ijs.0.02827-0 | ||
| 504 | |a Saitou, N., Nei, M., The neighbor-joining method: A new method for reconstructing phylogenetic trees (1987) Mol Biol Evol, 4, pp. 406-425. , 3447015 | ||
| 504 | |a Shivaji, S., Vijama Bhanu, N., Aggarwal, R.K., Isolation and identification of Pseudomonas spp. from Schirmacher Oasis, Antarctica (1989) Appl Environ Microbiol, 55, pp. 767-770. , 2930174 | ||
| 504 | |a Timm, A., Steinbüchel, A., Formation of polyesters consisting of medium-chain-length 3-hydroxyalkanoic acids from gluconate by Pseudomonas aeruginosa and other fluorescent pseudomonads (1990) Appl Environ Microbiol, 56, pp. 3360-3367. , 2125185 | ||
| 504 | |a Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., Higgins, D.G., The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools (1997) Nucleic Acids Research, 25 (24), pp. 4876-4882. , DOI 10.1093/nar/25.24.4876 | ||
| 504 | |a Vogel, H.J., Bonner, B.N., Acetyl-ornithinase of Escherichia coli: Partial purification and some properties (1956) J Biol Chem, 218, pp. 97-106. , 13278318 | ||
| 520 | 3 | |a A Gram-negative, mobile, rod-shaped, non-spore-forming bacterium (strain 14-3T) was isolated from a temporary pond in Antarctica. On the basis of 16S rRNA gene sequence similarity, strain 14-3T was shown to belong to the genus Pseudomonas sensu stricto. Physiological and biochemical tests supported the phylogenetic affiliation. Strain 14-3T is closely related to Pseudomonas veronii DSM 11331T, sharing 99.7% sequence similarity. DNA-DNA hybridization experiments between the two strains showed only moderate reassociation similarity (35.1%). Tests for arginine dihydrolase and nitrate reduction were positive, while those for denitrification, indol production, glucose acidification, urease, -galactosidase, esculin, caseine and gelatin hydrolysis were negative. Growth of this bacterium occurred in a range from 4 to 37°C but not at 42°C. It accumulated poly(3-hydroxybutyrate) when grown on sodium octanoate medium. Strain 14-3T therefore represents the type strain of a new species, for which the name Pseudomonas extremaustralis sp. nov. is proposed. The type strain 14-3T has been deposited as DSM 17835T and as CIP 109839T. © 2009 Springer Science+Business Media, LLC. |l eng | |
| 593 | |a Dpto. de Qca. Biológica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina | ||
| 593 | |a DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen, Braunschweig, Germany | ||
| 593 | |a Institut für Molekulare Mikrobiologie und Biotechnologie, Westfälischen Wilhelms-Universität Münster, Münster, Germany | ||
| 690 | 1 | 0 | |a ARGININE DEIMINASE |
| 690 | 1 | 0 | |a BETA GALACTOSIDASE |
| 690 | 1 | 0 | |a CASEIN |
| 690 | 1 | 0 | |a ESCULIN |
| 690 | 1 | 0 | |a GELATIN |
| 690 | 1 | 0 | |a INDOLE |
| 690 | 1 | 0 | |a POLY(3 HYDROXYBUTYRIC ACID) |
| 690 | 1 | 0 | |a RNA 16S |
| 690 | 1 | 0 | |a UREASE |
| 690 | 1 | 0 | |a ACIDIFICATION |
| 690 | 1 | 0 | |a ANTARCTICA |
| 690 | 1 | 0 | |a ARTICLE |
| 690 | 1 | 0 | |a BACTERIAL GROWTH |
| 690 | 1 | 0 | |a BACTERIAL STRAIN |
| 690 | 1 | 0 | |a CONTROLLED STUDY |
| 690 | 1 | 0 | |a DENITRIFICATION |
| 690 | 1 | 0 | |a DNA DNA HYBRIDIZATION |
| 690 | 1 | 0 | |a GENE SEQUENCE |
| 690 | 1 | 0 | |a HYDROLYSIS |
| 690 | 1 | 0 | |a NITRATE REDUCING BACTERIUM |
| 690 | 1 | 0 | |a NONHUMAN |
| 690 | 1 | 0 | |a NUCLEOTIDE SEQUENCE |
| 690 | 1 | 0 | |a PRIORITY JOURNAL |
| 690 | 1 | 0 | |a PSEUDOMONAS |
| 690 | 1 | 0 | |a PSEUDOMONAS EXTREMAUSTRALIS |
| 690 | 1 | 0 | |a PSEUDOMONAS SENSU STRICTO |
| 690 | 1 | 0 | |a TEMPERATURE SENSITIVITY |
| 690 | 1 | 0 | |a ANTARCTIC REGIONS |
| 690 | 1 | 0 | |a DNA, BACTERIAL |
| 690 | 1 | 0 | |a DNA, RIBOSOMAL |
| 690 | 1 | 0 | |a HYDROXYBUTYRATES |
| 690 | 1 | 0 | |a MOLECULAR SEQUENCE DATA |
| 690 | 1 | 0 | |a PHYLOGENY |
| 690 | 1 | 0 | |a POLYESTERS |
| 690 | 1 | 0 | |a PSEUDOMONAS |
| 690 | 1 | 0 | |a RNA, RIBOSOMAL, 16S |
| 690 | 1 | 0 | |a BACTERIA (MICROORGANISMS) |
| 690 | 1 | 0 | |a NEGIBACTERIA |
| 690 | 1 | 0 | |a PSEUDOMONAS |
| 690 | 1 | 0 | |a PSEUDOMONAS VERONII |
| 700 | 1 | |a Pettinari, M.J. | |
| 700 | 1 | |a Stackebrandt, E. | |
| 700 | 1 | |a Tribelli, P.M. | |
| 700 | 1 | |a Põtter, M. | |
| 700 | 1 | |a Steinbüchel, A. | |
| 700 | 1 | |a Méndez, B.S. | |
| 773 | 0 | |d 2009 |g v. 59 |h pp. 514-519 |k n. 5 |p Curr. Microbiol. |x 03438651 |w (AR-BaUEN)CENRE-160 |t Current Microbiology | |
| 856 | 4 | 1 | |u https://www.scopus.com/inward/record.uri?eid=2-s2.0-70349962990&doi=10.1007%2fs00284-009-9469-9&partnerID=40&md5=a3dc138eddaab40087c834b79faf9bd5 |y Registro en Scopus |
| 856 | 4 | 0 | |u https://doi.org/10.1007/s00284-009-9469-9 |y DOI |
| 856 | 4 | 0 | |u https://hdl.handle.net/20.500.12110/paper_03438651_v59_n5_p514_Lopez |y Handle |
| 856 | 4 | 0 | |u https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_03438651_v59_n5_p514_Lopez |y Registro en la Biblioteca Digital |
| 961 | |a paper_03438651_v59_n5_p514_Lopez |b paper |c PE | ||
| 962 | |a info:eu-repo/semantics/article |a info:ar-repo/semantics/artículo |b info:eu-repo/semantics/publishedVersion | ||
| 999 | |c 69323 | ||