Heparan sulfate, heparin, and heparinase activity detection on polyacrylamide gel electrophoresis using the fluorochrome tris(2,2′-bipyridine) ruthenium

The paper shows the ability of the fluorochrome tris(2,2′-bipyridine) ruthenium (II) (Rubipy) to detect heparan sulfate, heparin, and heparinase activity of M3 murine mammary adenocarcinoma cells as well as bacterial heparinases I, II, and III in native polyacrylamide gel electrophoresis (PAGE). The...

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Autor principal: Rozenberg, G.I
Otros Autores: Espada, J., de Cidre, L.L, Eiján, A.M, Calvo, J.C, Bertolesi, G.E
Formato: Capítulo de libro
Lenguaje:Inglés
Publicado: 2001
Acceso en línea:Registro en Scopus
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Registro en la Biblioteca Digital
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024 7 |2 scopus  |a 2-s2.0-0035165166 
024 7 |2 cas  |a 2,2' bipyridine, 366-18-7; fluorochrome, 37332-03-9; heparan sulfate, 9050-30-0; heparin, 37187-54-5, 8057-48-5, 8065-01-8, 9005-48-5; heparin lyase, 37290-85-0, 9025-39-2; tris(2,2' bipyridine)ruthenium, 14323-06-9; 2,2'-Dipyridyl, 366-18-7; Fluorescent Dyes; Heparin, 9005-49-6; Heparin Lyase, 4.2.2.7; Heparitin Sulfate, 9050-30-0; Polysaccharide-Lyases, 4.2.2.-; heparinase II, 4.2.2.-; heparitinsulfate lyase, 4.2.2.8; tris(2,2'-bipyridine)ruthenium II, 15158-62-0 
040 |a Scopus  |b spa  |c AR-BaUEN  |d AR-BaUEN 
030 |a ELCTD 
100 1 |a Rozenberg, G.I. 
245 1 0 |a Heparan sulfate, heparin, and heparinase activity detection on polyacrylamide gel electrophoresis using the fluorochrome tris(2,2′-bipyridine) ruthenium 
260 |c 2001 
270 1 0 |m Rozenberg, G.I.; Depto. de Química Biol., Fac. de Ciencias Exact. y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina; email: garozenb@qb.fcen.uba.ar 
506 |2 openaire  |e Política editorial 
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520 3 |a The paper shows the ability of the fluorochrome tris(2,2′-bipyridine) ruthenium (II) (Rubipy) to detect heparan sulfate, heparin, and heparinase activity of M3 murine mammary adenocarcinoma cells as well as bacterial heparinases I, II, and III in native polyacrylamide gel electrophoresis (PAGE). The technique is based on the electrophoretic mobility of high molecular weight heparins and subsequent staining with Rubipy (50 μg/mL). The minimum content of heparin detected by fluorescence in a UV transilluminator was 25-50 ng. The number of Rubipy molecules bound to heparin, determined in relationship to the number of disaccharide units (DU), showed that two to six heparin disaccharide units are bound by each fluorochrome molecule. Scatchard plot analysis showed one Rubipy-binding site (Kd= (8.56 ± 2.97) × 10-5 M). Heparinase activity was determined by densitometric analysis of the fluorescence intensity of the heparin-containing band of the gel. While heparinase I (EC 4.2.2.7.) degraded heparin and, to a lower degree, partially N-desulfated N-acetylated heparin (N-des N-Ac), heparinase II (no EC number) could efficiently degrade heparan sulfate (HS) and partially N-des N-Ac heparin. Finally, heparinase III (EC 4.2.2.8.) degraded HS almost exclusively. Only heparin and N-des N-Ac heparin were substrates for M3 tumor cell heparinases. We describe a qualitative, sensitive and simple method to detect heparinase activity and determine its substrate specificity using Rubipy fluorescence with heparin and heparan sulfate in multiple biological samples tested in parallel.  |l eng 
593 |a Departamento de Química Biológica, Argentina 
593 |a Departamento de Ciencas Biológicas, Universidad de Buenos Aires, Argentina 
593 |a Instituto de Investigaciones Biomédicas, Consejo Superior de Investigaciones Científicas, Universidad Autónoma de Madrid, Madrid, Spain 
593 |a Instituto de Oncología 'A.H.Roffo', Universidad de Buenos Aires, Argentina 
593 |a Departamento de Química Biológica, Universidad de Buenos Aires, Argentina 
690 1 0 |a HEPARAN SUTFATE 
690 1 0 |a HEPARIN 
690 1 0 |a HEPARINASE 
690 1 0 |a TRIS (2,2′BIPYRIDINE) RUTHENIUM (II) EL 4139 
690 1 0 |a 2,2' BIPYRIDINE 
690 1 0 |a FLUOROCHROME 
690 1 0 |a HEPARAN SULFATE 
690 1 0 |a HEPARIN 
690 1 0 |a HEPARIN LYASE 
690 1 0 |a RUTHENIUM COMPLEX 
690 1 0 |a TRIS(2,2' BIPYRIDINE)RUTHENIUM 
690 1 0 |a UNCLASSIFIED DRUG 
690 1 0 |a ADENOCARCINOMA 
690 1 0 |a ANALYTIC METHOD 
690 1 0 |a ANIMAL CELL 
690 1 0 |a ARTICLE 
690 1 0 |a BINDING SITE 
690 1 0 |a CARCINOMA CELL 
690 1 0 |a DENSITOMETRY 
690 1 0 |a ELECTROPHORETIC MOBILITY 
690 1 0 |a ENZYME ACTIVITY 
690 1 0 |a ENZYME SPECIFICITY 
690 1 0 |a FLUORESCENCE 
690 1 0 |a NONHUMAN 
690 1 0 |a POLYACRYLAMIDE GEL ELECTROPHORESIS 
690 1 0 |a 2,2'-DIPYRIDYL 
690 1 0 |a ADENOCARCINOMA 
690 1 0 |a ANIMALS 
690 1 0 |a ELECTROPHORESIS, POLYACRYLAMIDE GEL 
690 1 0 |a FEMALE 
690 1 0 |a FLUORESCENT DYES 
690 1 0 |a HEPARIN 
690 1 0 |a HEPARIN LYASE 
690 1 0 |a HEPARITIN SULFATE 
690 1 0 |a MAMMARY NEOPLASMS, ANIMAL 
690 1 0 |a MICE 
690 1 0 |a MOLECULAR STRUCTURE 
690 1 0 |a POLYSACCHARIDE-LYASES 
690 1 0 |a TUMOR CELLS, CULTURED 
700 1 |a Espada, J. 
700 1 |a de Cidre, L.L. 
700 1 |a Eiján, A.M. 
700 1 |a Calvo, J.C. 
700 1 |a Bertolesi, G.E. 
773 0 |d 2001  |g v. 22  |h pp. 3-11  |k n. 1  |p Electrophoresis  |x 01730835  |w (AR-BaUEN)CENRE-4560  |t Electrophoresis 
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